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Bordeaux
38 Rue Albert Marquet, 33000 Bordeaux, France
12/12/2019 12:00 am
29/02/2020 9:00 am
03/03/2020 6:00 pm
English
350€
Description of the training activity
This training school will cover the basics of image analysis using ImageJ/Fiji, as well as image analysis workflow automation using ImageJ macro programming. In addition, it will be taught how to use the software package ilastik for machine learning based image segmentation and object classification, and how to integrate ilastik into ImageJ macro based workflows. Moreover, an overview of further relevant bioimage analysis software packages will be given and there will be ample time for “Work on Your Own Data” sessions assisted by experienced Analysts.
Biological, Core Facility Staff Career
Msc students, PhD students, Post-docs, Early career scientists (less than 8 years from the date of the PhD/doctorate), Core Facility Staff, Researchers
Bio informatics
Hard Skills - Evaluation and test on imaging software (per categories: coloc, 3D recons, registration, tracking...), Principles of ImageJ Fiji, Workflow building and automation, Overview of existing software for bioimage data analysis
Basic
Contact for registration/administrative aspects:
Neubias Training School Team