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Bordeaux
Bordeaux Imaging Center, Bordeaux, France
20/04/2026 12:00 am
04/05/2026 8:00 am
05/05/2026 5:00 pm
Description of the training activity
QuPath is an open-source, multi-platform software dedicated to analysis of images originating from slide scanners, but not just that…
It offers a wide possibility for an easy and efficient way to detect, characterize and classify objects, from anatomical structures up to intracellular compartments.
The program of the training will be the following:
- Import of Data
- How to manipulate colored/fluorescent images
- How to create manual or automatic annotations (regions of interest)
- Extract and visualize measurements
- Creation and management of the different classes
- Pixel classification: How to create a model
- Automatic cell detection
- Object classification: based on statistics or by Machine Learning
- Bonus: Use StarDist as Cell Detection module
More info and registration file here: https://greta-cfa-aquitaine.fr/fiches/initiation-au-traitement-et-a-lanalyse-dimages-avec-qupath/
Hard Skills - Image analysis
Basic
Contact for registration/administrative aspects:
Florence NONES