Going to Rendez-Vous Carnot 2024? Drop by our booth !

On October 16th, we will at the Palais des Congrès de Massy for the Rendez-Vous Carnot 2024! This is the sixth time that we will attend the forum as an exhibitor, in the Research Infrastructures Village. We are going to present France-BioImaging R&D ecosystem and the multiple advanced biological microscopy technology developments taking place on FBI imaging platforms and R&D teams. With 109 laboratories and 70 technologies, we offer services, training and research collaborations for the private sector. From healthcare and cosmetics to food-processing and environment, microscopy can answer the needs of a wide range of markets and sample types.

If you are attending the Rendez-Vous Carnot as well, be sure to drop by our booth  (at the Research Infrastructure Village) and meet some of our colleagues at the venue:

  • Caroline Thiriet , France-BioImaging External Affairs Manager
  • Samy Al-Bourgol, France-BioImaging Business Officer

Schedule a meeting with us through the Rendez-Vous Carnot portal: https://www.rdv-carnot.com/index.php

We will be happy to discuss with you!

En Hybride. Inscription gratuite mais obligatoire. Le lien d’inscription sera communiqué prochainement.

La valorisation de l’activité de recherche implique de nombreuses modalités. Parmi elles, la diffusion des résultats au-delà du cercle communautaire académique peut prendre la forme de la protection intellectuelle et de la commercialisation, ouvrant ainsi la perspective de rendre accessible une technologie au plus grand nombre et d’en assurer une valorisation monétaire. Cette étape demeure cependant pratiquée par un nombre limité de chercheurs, entre autres par méconnaissance de l’aventure du transfert.

L’objectif de cette journée est précisément de pallier ce manque au travers de témoignages variés de chercheurs, de directeurs de startups, de responsables d’entreprises, et d’acteurs des services de valorisation qui ont converti un résultat scientifique dans le domaine de l’imagerie biologique en un produit ou un service commercialisé. Ils décriront leur motivation et leur parcours avec ses difficultés et ses satisfactions. La journée prévoit aussi un temps de rencontre et une table ronde finale destinée à partager d’autres témoignages et à répondre aux interrogations.

Programme

Lieu: Amphithéâtre Buffon
INSTITUT JACQUES MONOD
Université Paris Cité- CNRS
15 rue Hélène Brion
75013 Paris

Contacts:

nathalie.aulner@pasteur.fr

Ludovic.Jullien@ens.fr

rene-marc.mege@ijm.fr

samy.al-bourgol@france-bioimaging.org

We are delighted to announce that the GDR Imabio, in partnership with France-Bioimaging, is organizing the next “High Resolution 3D Microscopy in Biology: Developments & Applications”, which will cover a wide range of topics, from new instrumental approaches to biological applications, particularly for imaging in depth and/or in complex environments (Super-resolution – Expansion microscopy – STORM in depth – in vivo STED – in vivo 2 photon microscopy – Phase and Label free imaging – Structured Illumination Microscopy – Light sheet microscopy – Adaptive optics – Tissue imaging – Organoids… ).

The event will be held on the campus of the Université Paris Saclay, at the ISMO, from Monday afternoon, October 7, starting at 2pm, to Tuesday, October 8, around 4pm (several TGV trains arrive at Massy Palaiseau, 15 minutes from the campus).
We have already confirmed the participation of various speakers (Ralf Jungmann, Erdinc Sezgin, Sophie Brasselet, Gaëlle Recher, Virgile Viasnoff), and the call for oral and poster contributions is now open. Submit your abstract before September 25th through the registration form below.

The days will be free of charge, but registration is compulsory, as the size of the amphitheatre will limit participation to 80 registered participants.

Register and submit your abstract here: https://imabio-cnrs.fr/event/high-resolution-3d-microscopy-in-biology-developments-applications-october-7-8-2024-organise-en-commun-avec-fbi/

The organizing committee

Sandrine Lévêque-Fort, Alexandra Fragola, Jean-Baptiste Sibarita, Rémi Galland, Mathieu Ducros, Lydia Danglot

This workshop will take place at the Institut Fresnel (FBI Marseille node) from November 12th to 14th , 2024.

Fluorescence polarization microscopy allows measurements of the orientation of molecules probed by various techniques. Through hands-on experiments, we will demonstrate their suitability for biological applications on a range of sample types, including cells and organisms.
The Institut Fresnel is a pioneer in this field, developing unique microscopes to probe molecular orientation – an intrinsic property of molecules that is measurable with all types of microscopes but often remains inaccessible.

The workshop aims to offer (1) a theoretical basis for understanding how one can probe molecular orientation, (2) ample time for practical experiments, and (3) opportunities for formal and informal discussions on technical details and biological applications.

Interested in attending this workshop? Please complete the following form by October 1st, 2024:
FLUORESCENCE POLARISATION MICROSCOPY WORKSHOP 2024 | Framaforms.org

Limited to 16 participants.

Free registration includes accommodation, transport, and meals (except for the evening of November 13th).

Candidates whose research projects align best with the workshop’s focus will be selected,
with preference given to members of the France-BioImaging (FBI) infrastructure.

Flyer & Programme

Following the successful COMULIS conferences in Austria, Sweden and Cyprus, the next COMULIS conference will expand beyond European borders.

The upcoming COMULISglobe Conference will take place at Stellenbosch University (https://www.sun.ac.za), South Africa from January 20th-21st, 2025.

This conference is designed to bring global experts, researchers, facility staff and exhibitors together from different imaging modalities to stimulate knowledge exchange and the formation of new collaborations. The conference program offers an attractive combination of oral presentations and posters regarding CLEM techniques from sample preparation to image analysis. 

PRELIMINARY CONFERENCE PROGRAM

For attendees from low or middle-income* countries, the conference registration fee is USD 50 for students and USD 100 for non-students. Participants from high-income countries are required to pay a fee of USD 250. This fee includes meals and refreshments for the duration of the conference.

This exciting scientific meeting will take place as an in-person event.

January 22nd – 24th a Correlated Multimodal Imaging workshop will be held at Stellenbosch University as well as Tygerberg Campus. The workshop is free if charge, but a selection process will be followed.

Only participants of the conference are eligible for the workshop.

PRELIMINARY WORKSHOP PROGRAM

On the 1st of July 2024, René Marc Mège officially joined the France-BioImaging team as Scientific Director. René Marc is a CNRS research director and co-director of the interdisciplinary Biology/Physics “Adhesion and Cell Mechanics” team with Benoit Ladoux at Institut Jacques Monod, Paris. He has been involved in the coordination of core facilities for more than ten years as co-director of the  ImagoSeine cell imaging facility and leads the coordination of France-BioImaging Paris Centre Node.

Here is a brief interview to get to know the new leader of the FBI team.

  • What triggered the start of your journey in science?

Actually, science was not my first choice. I would have loved to be a farmer like my parents. But part of this choice lies in the fact that I have always been amazed by nature and then by biology when arriving at Université de Bordeaux. At that time, I discovered and loved the essay “Le hazard et la nécessité” by Jacques Monod, published a decade before, in 1970. The second reason was that I thought that there would be some place for freedom in the job. It was true, at least at the time.

  • Can you tell us a bit more about your scholar and research background?

I was trained in Biochemistry/Chemistry at the Université de Bordeaux. I began my scientific career in the field of enzymology and biotechnology with a PhD (1986) in D. Thomas Laboratoire de Technologie Enzymatique (Université de Technologie de Compiègne), where my thesis project was part of a heterogeneous-phase enzymatic catalysis research program aimed at assessing the industrial application of biological catalysts (hydrogenases) to convert electricity in hydrogen. After this PhD, I turned to the field of cell and developmental biology. I really got into this field during a 3-year postdoctoral fellowship (1987-1989) in G. M. Edelman laboratory at Rockefeller University, New York.

  • Can you tell us about your work at IJM, and how it has influenced your journey as a researcher?

On my return to France, I focused on the expression, developmental role and function of cadherins in neuromuscular development. In the 2000’s, I shifted towards a more molecular and biophysical study of cadherin-dependent interactions, echoing the development of increasingly powerful imaging and analysis approaches. To this end, we developed a model for the activation of cadherin in the absence of intercellular contacts, based on the use of recombinant cadherins immobilised on various surfaces. By combining dynamic imaging, single particle tracking, FRAP and pharmacology (in coll with D. Choquet), we have shown that: 1) cadherin engagement induces their clustering and anchoring to the actin cytoskeleton; 2) that cadherins are recruited to cell contacts by a diffusion- trapping mechanism, regulated by their association with actin.

As early as 2002, this work enabled us to put forward the hypothesis – totally novel at the time – that cadherins could be mechanotransducing receptors. I therefore approached Benoit Ladoux, who had just developed a micro force sensor for measuring the forces applied by cells on the ECM. Combining this sensor with the use of recombinant cadherins, we were able to demonstrate that cadherin adhesions transmit across the membrane the forces generated actomyosin and are mechanosensitive, implying the existence of a molecular mechanosensor in these actin-associated complexes.

This work and hypotheses were the primary motivation behind the intensification of our collaboration with Benoit Ladoux, which led us to create in 2013 at the Institut Jacques Monod a shared team gathering cell biologists and physicists. We were both convinced that the only way to make significant progress in mechanobiology was not to recruit researchers at the interface, but to bring together researchers, post-docs and students trained at the cutting edge of their respective disciplines, with a willingness to work together. Together we have contributed to a better understanding of the molecular and cellular biology of cadherin-associated intercellular junctions, using microscopy-based approaches including traction force microscopy, stress inference, particle imaging velocimetry and high resolution microscopy. 

From then, by combining our combined expertise in cell biology, microfabrication, biophysics and soft matter physics, we have been also able to develop innovative studies to describe the biomechanical properties of epithelial tissues and model them in collaboration with teams of theorists. 

  • You are now the new Director of France-BioImaging. Can you tell us what motivated this transition?

For many years, first at Sorbonne Université then at Université Paris-Cité, I have taken part in the coordination of the local Imaging Facilities. And during the last years, I have been more involved in France-BioImaging as head of the Paris-Centre node. Although I always dedicated time to the scientific and in particular, to the imaging community, I think I am now at an age where I should share even more of my time for the community. I am very convinced that the time and effort you devote to others always rewards you. 

  • What do you expect from this new professional adventure?

It is a new challenge and quite stimulating for me. Moreover, the FBI community is a very friendly and cooperative one.

  • Can you tell us how research infrastructures like FBI can help researchers?

FBI core facilities and R&D teams offer an amazing large range of cutting-edge technologies, instruments, workflows, and pool of skills. FBI is a huge instrument. It’s however a living organism. Its heart is human-based, with its community of engineers, researchers, teachers and students, with their skills and competences, their personalities and collaborations, gives FBI its unique value. In the end, when researchers looking for imaging solutions know how to take advantage of the research infrastructures for their projects, they are able to increase their competitiveness in the global research race.

  • What do you envision for FBI in the next few years?

The creation of the Unité d’Appui à la Recherche (UAR FBI-core) initiated by Edouard Bertrand and Alexandre Philips, and the previous national coordination team (we should thank them all here) will for sure participate to strengthen and bring more sustainability to FBI . This will allow us to concentrate our efforts on leading the community organisation initiatives and seeking new funding opportunities. This will also allow us to dedicate more resources to support our core facilities in their development and outreach. Through our R&D teams, we will keep on incorporating novel cutting-edge technologies and workflows. And I am convinced that with our team of data scientists and IT engineers, and with the whole FBI community we will take the right turn in accelerating developments in data processing and data mining.  

The France-BioImaging CLEM working group is pleased to announce the organization of the next CryoCLEM Workshop, to be held from October 14 to 15, in Bordeaux.

This workshop is the ideal event to be introduced to, and to gain knowledge of, the cryoCLEM technology, with the aim of applying it to your research project.

It will be composed of a theoretical part, presented by experts in this technology, and a practical part covering the entire cryoCLEM workflow (from sample preparation to correlative microscopy in cryogenic conditions).

Programme

In order to ensure the best conditions for this workshop, the event is limited to 4 participants.

The selection will be made on the possibility of rapid implementation of the cryoCLEM technology for your research project.

A pre-registration questionnaire is therefore available until 31st August 2024 :  CryoCLEM Workshop

This training covers lunches and accommodation.

For more information, please contact :

noemie.pied@u-bordeaux.fr 

monica.fernandez-monreal@u-bordeaux.fr

Banner picture copyrights: images 1 & 3 R. Anger, image 4 P. Lapios, image 2 N. Pied

The first meeting of the FBI Mechanobiology WG will take place on the 2 and 3 of December 2024 at the Centre for Integrative Biology (https://cbi-toulouse.fr/fr/) in Toulouse..

The programme will include a seminar by Matthieu Piel (Institut Curie/Institut Pierre Gilles de Gennes), presentations by participants and practical mechanobiology workshops (a choice of 3 workshops from a dozen: optical tweezers, bioprinting, microfluidics, AFM, Brillouin, finite element modelling, mechanical confinement, force measurements, etc.).

Registration is free, but places are limited and priority will be given to contributors whose abstracts have been selected.

The choice of workshops will be made at a later stage.

Preliminary Programme:

Monday, December 2nd

1pm: Welcome and seminar by Matthieu Piel

2-6pm: workshops

6pm: poster session and buffet

Tuesday, December 3rd

9am-12pm: presentations by participants (and coffee break)

12pm: buffet

1.30-4pm: workshops

Call for abstracts

TYPES OF PRESENTATIONS
  • Oral presentations: If you are selected for an oral presentation, you will have 15 minutes, including discussion (12 minutes presentation + 3 minutes Q&A).
  • Posters: If you are selected to present a poster, you will present your work at the dedicated poster session on December 2nd, afternoon.

Selected contributors will be notified at the end of September.

Registration/Abstract submission form

Journées GT FBI Mécanobiologie 2024

Personal information

Member of France-BioImaging
Dietary restrictions

Scientific contribution

You are invited to present news, innovations or any achievements related to Mechanobiology.

Maximum file size: 104.86MB

Please submit abstract here (.pdf).
By submitting this form entry, I acknowledge that:
– If my submission is accepted, I am to effectively present the day of the meeting, and will let the organizers know of any emergency preventing me to do so;
– For FBI members, please get in touch with your node to organize your visit. As for external speakers, you will be directly contacted by the Toulouse node.
– I consent to be photographed during the meeting, and for the pictures to be used in future France-BioImaging communications.
Sending

→ To carry out a biological imaging project in one of France-BioImaging facilities 

Deadline: June 26th, 2024

How it works:

Submit your project proposal through the form available here before June 26th, 2024, in order to be considered for a grant of up to 5000 Euros to access the imaging services at one of FBI facilities. Projects will be evaluated by a committee including FBI node representants and the national coordination members. Successful applicants will be notified by mid July 2024 and successful projects should be carried out between September and November 2024.

What the grant covers:

This grant covers the user’s travel and accommodation costs as well as access and consumable costs at FBI imaging facilities. Each successful applicant is eligible for up to 5000 Euros of support. 

Who is eligible:

The call is restricted to external users (national or international) of the targeted France-BioImaging facility, i.e. the applicant’s home University should not be within the institutional perimeter of the FBI facility hosting the project. Trans-Node access is eligible. Transnational projects and outside users are strongly encouraged to apply.

All academic scientists, regardless of gender, career phase, or field of interest, are eligible to apply. We strongly encourage early career researchers to apply for this grant.

Evaluation:

All applications will be evaluated for scientific excellence and technical feasibility by a committee including FBI Node representatives, FBI core facility staff representatives and the national coordination. Applicants are strongly encouraged to discuss their project and its technical feasibility with the targeted facility before submitting their project.

Up to 12 projects will be supported.

How to apply:

Applicants are invited to visit FBI website to discover the range of technologies provided by France-BioImaging facilities. Applicants are strongly encouraged to discuss their project and its technical feasibility with the targeted facility before submitting their project. Applicants will then submit their project filling out the form available here: https://france-bioimaging.org/application/france-bioimaging-call-for-user-access-projects-2024/

Projects have to be written in English.

For any question concerning this call, please contact us

France-BioImaging’s roadmap for managing and analyzing data produced by the infrastructure spans several areas, supported by the transversal node Image Processing and Data Management (BioImage Informatics), as well as engineers and researchers distributed across various nodes.

Two geographically distributed teams are developing solutions: FBI.data for managing microscopy data, from metadata management to using data centers and regional computing centers, pooling efforts for the entire infrastructure; and F-BIAS to develop image analysis as a national service offering within the infrastructure. These distributed groups meet frequently via video conferencing and twice a year in person.

The FBI.Data and FB-IAS teams at the FBI Data Sprint Spring 2024 Edition

The Bordeaux Spring 2024 Edition allowed progress on the test deployment of the FBI.data solution, welcoming the latest F-BIAS recruits, and offering a live open desk. It also involved joint sessions between the two teams to address the challenge of making powerful but complex infrastructure accessible to our users, as well as discussing upcoming and ongoing challenges like the Lightmycells – Grand Challenge at grand-challenge.org

The event also featured a public progress update via videoconference, with recordings available here: